change bcast log format

    Therefore the same communicator may have different members at
    different time. In this version  we use local communicator index
    instead of communicator id to identify different communicator.

	modified:   ../openmpi/ompi/mpi/c/allgather.c
	modified:   ../openmpi/ompi/mpi/c/allgatherv.c
	modified:   ../openmpi/ompi/mpi/c/allreduce.c
	modified:   ../openmpi/ompi/mpi/c/alltoall.c
	modified:   ../openmpi/ompi/mpi/c/alltoallv.c
	modified:   ../openmpi/ompi/mpi/c/alltoallw.c
	modified:   ../openmpi/ompi/mpi/c/barrier.c
	modified:   ../openmpi/ompi/mpi/c/bcast.c
	modified:   ../openmpi/ompi/mpi/c/comm_create.c
	modified:   ../openmpi/ompi/mpi/c/comm_create_group.c
	modified:   ../openmpi/ompi/mpi/c/comm_dup.c
	modified:   ../openmpi/ompi/mpi/c/comm_group.c
	modified:   ../openmpi/ompi/mpi/c/comm_join.c
	modified:   ../openmpi/ompi/mpi/c/comm_split.c
	modified:   ../openmpi/ompi/mpi/c/finalize.c
	modified:   ../openmpi/ompi/mpi/c/gather.c
	modified:   ../openmpi/ompi/mpi/c/gatherv.c
	modified:   ../openmpi/ompi/mpi/c/init.c
	modified:   ../openmpi/ompi/mpi/c/irecv.c
	modified:   ../openmpi/ompi/mpi/c/isend.c
	modified:   ../openmpi/ompi/mpi/c/recv.c
	modified:   ../openmpi/ompi/mpi/c/reduce.c
	modified:   ../openmpi/ompi/mpi/c/rsend.c
	modified:   ../openmpi/ompi/mpi/c/scatter.c
	modified:   ../openmpi/ompi/mpi/c/send.c
	modified:   ../openmpi/ompi/mpi/c/ssend.c
	modified:   ../openmpi/ompi/mpi/c/test.c
	modified:   ../openmpi/ompi/mpi/c/testall.c
	modified:   ../openmpi/ompi/mpi/c/testany.c
	modified:   ../openmpi/ompi/mpi/c/testsome.c
	modified:   ../openmpi/ompi/mpi/c/wait.c
	modified:   ../openmpi/ompi/mpi/c/waitall.c
	modified:   ../openmpi/ompi/mpi/c/waitany.c
	modified:   ../openmpi/ompi/mpi/c/waitsome.c
	modified:   ../readme.md
	modified:   ../replayer/Makefile
	new file:   ../replayer/Makefile.gnu
	new file:   ../replayer/Makefile.intel
	modified:   ../replayer/include/GlobalComm.hpp
	modified:   ../replayer/include/msglog.h

	modified:   ../../openmpi/ompi/mpi/c/finalize.c
	modified:   ../../openmpi/ompi/mpi/c/gather.c
	modified:   ../../openmpi/ompi/mpi/c/gatherv.c
	modified:   ../../openmpi/ompi/mpi/c/init.c
	modified:   ../../openmpi/ompi/mpi/c/irecv.c
	modified:   ../../openmpi/ompi/mpi/c/isend.c
	modified:   ../Makefile
	modified:   commset.h
	new file:   commset.inc
	modified:   msglog.h
	deleted:    ../src/GlobalComm.c
	deleted:    ../src/commset.c

    1. Reorganize the program's structure
    2. Fix the bug in commset

	modified:   openmpi/ompi/mpi/c/bcast.c
	modified:   openmpi/ompi/mpi/c/finalize.c
	modified:   openmpi/ompi/mpi/c/gather.c
	modified:   openmpi/ompi/mpi/c/gatherv.c
	modified:   openmpi/ompi/mpi/c/init.c
	modified:   openmpi/ompi/mpi/c/irecv.c
	modified:   openmpi/ompi/mpi/c/isend.c
	modified:   replayer/Makefile
	modified:   replayer/include/commset.h
	modified:   replayer/include/msglog.h
	deleted:    replayer/src/GlobalComm.c
	deleted:    replayer/src/commset.c

	modified:   replayer/Makefile
	deleted:    replayer/include/GlobalComm.h
	modified:   replayer/include/commset.h
	renamed:    replayer/include/_MSGLOG_.h -> replayer/include/msglog.h
	new file:   replayer/src/GlobalComm.c
	deleted:    replayer/src/GlobalComm.cpp
	modified:   replayer/src/commset.c

    rewrite GlobalComm with standard c instead of c++, so it can be used
    inside openmpi

    add instructions for usages

	new file:   bin/.bin
	renamed:    GlobalComm.h -> include/GlobalComm.h
	renamed:    ../openmpi-4.1.1/ompi/mpi/c/_MSGLOG_.h -> include/_MSGLOG_.h
	new file:   include/commset.h
	renamed:    createMPIComm.h -> include/createMPIComm.h
	renamed:    read_run.h -> include/read_run.h
	new file:   lib/.lib
	renamed:    GlobalComm.cpp -> src/GlobalComm.cpp
	renamed:    commset.h -> src/commset.c
	renamed:    createMPIComm.cpp -> src/createMPIComm.cpp
	renamed:    mpi_player.cpp -> src/mpi_player.cpp
	renamed:    read_run.cpp -> src/read_run.cpp

    setup new directories

	modified:   openmpi-4.1.1/ompi/mpi/c/allgather.c
	modified:   openmpi-4.1.1/ompi/mpi/c/allgatherv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/allreduce.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoall.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoallv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoallw.c
	modified:   openmpi-4.1.1/ompi/mpi/c/barrier.c
	modified:   openmpi-4.1.1/ompi/mpi/c/bcast.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_create.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_create_group.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_dup.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_join.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_split.c
	modified:   openmpi-4.1.1/ompi/mpi/c/finalize.c
	modified:   openmpi-4.1.1/ompi/mpi/c/gather.c
	modified:   openmpi-4.1.1/ompi/mpi/c/gatherv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/init.c
	modified:   openmpi-4.1.1/ompi/mpi/c/irecv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/isend.c
	modified:   openmpi-4.1.1/ompi/mpi/c/recv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/reduce.c
	modified:   openmpi-4.1.1/ompi/mpi/c/rsend.c
	modified:   openmpi-4.1.1/ompi/mpi/c/scatter.c
	modified:   openmpi-4.1.1/ompi/mpi/c/send.c
	modified:   openmpi-4.1.1/ompi/mpi/c/ssend.c
	new file:   replayer/GlobalComm.cpp
	new file:   replayer/GlobalComm.h
	new file:   replayer/commset.h

Add local communicator id to global communicator id map to fix the bug
when the communication does not happen on MPI_COMM_WORLD

    add description for more functions

	modified:   openmpi-4.1.1/ompi/mpi/c/barrier.c
	modified:   openmpi-4.1.1/ompi/mpi/c/bcast.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_create.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_create_group.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_dup.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_group.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_join.c
	modified:   openmpi-4.1.1/ompi/mpi/c/comm_split.c

	modified:   createMPIComm.cpp
	modified:   createMPIComm.h
	modified:   mpi_player.cpp
	modified:   read_run.cpp
	modified:   read_run.h

    1. fix paser input file error
    2. add debug option

remove multiple definition variables

	new file:   replayer/Makefile
	new file:   replayer/createMPIComm.cpp
	new file:   replayer/createMPIComm.h
	deleted:    replayer/function_list.h
	modified:   replayer/mpi_player.cpp
	new file:   replayer/read_run.cpp
	new file:   replayer/read_run.h
passed compile with gcc 8.3.1
tested with allreduce

	modified:   bcast.c
	modified:   gatherv.c
	modified:   init.c
change log directory to date and time
	modified:   ../../../../readme.md
	modified:   ../../../../replayer/mpi_player.cpp
finish programming, wait for test

	modified:   openmpi-4.1.1/ompi/mpi/c/allgather.c
	modified:   openmpi-4.1.1/ompi/mpi/c/allgatherv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/allreduce.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoall.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoallv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/alltoallw.c
	modified:   openmpi-4.1.1/ompi/mpi/c/bcast.c
	modified:   openmpi-4.1.1/ompi/mpi/c/finalize.c
	modified:   openmpi-4.1.1/ompi/mpi/c/gather.c
	modified:   openmpi-4.1.1/ompi/mpi/c/gatherv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/init.c
	modified:   openmpi-4.1.1/ompi/mpi/c/irecv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/isend.c
	modified:   openmpi-4.1.1/ompi/mpi/c/recv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/reduce.c
	modified:   openmpi-4.1.1/ompi/mpi/c/rsend.c
	modified:   openmpi-4.1.1/ompi/mpi/c/scatter.c
	modified:   openmpi-4.1.1/ompi/mpi/c/scatterv.c
	modified:   openmpi-4.1.1/ompi/mpi/c/send.c
	modified:   openmpi-4.1.1/ompi/mpi/c/ssend.c
	modified:   openmpi-4.1.1/ompi/mpi/c/test.c
	modified:   openmpi-4.1.1/ompi/mpi/c/testall.c
	modified:   openmpi-4.1.1/ompi/mpi/c/testany.c
	modified:   openmpi-4.1.1/ompi/mpi/c/testsome.c
	modified:   openmpi-4.1.1/ompi/mpi/c/wait.c
	modified:   openmpi-4.1.1/ompi/mpi/c/waitall.c
	modified:   openmpi-4.1.1/ompi/mpi/c/waitany.c
	modified:   openmpi-4.1.1/ompi/mpi/c/waitsome.c
	modified:   readme.md
	new file:   replayer/function_list.h
	new file:   replayer/mpi_player.cpp

add some MPI recorder functions