- Dec 14, 2007
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Wouter Verkerke authored
o (Large number of classes) - Systematically use Riosfwd.h in header files instead of <iostream> or Riostream.h - Include "Riostream.h" in implementations where necessary - Convert remaining <iostream> to "Riostream" in implementations - Outline all inline functions using cout or endl to facilitate use of fwd declaration of iostreams in all classes - Elimination of some duplicate headers - Match use of 'using namespace std' in implementation files to classes that actually use STL classes git-svn-id: http://root.cern.ch/svn/root/trunk@21379 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 10, 2007
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Rene Brun authored
Fix compilation warnings due to the use of fabs. Fix a silly problem in RooClassFactory.cxx git-svn-id: http://root.cern.ch/svn/root/trunk@21314 27541ba8-7e3a-0410-8455-c3a389f83636
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Rene Brun authored
o RooAbsSelfCachedPdf, RooAbsCacheElement, RooFFTConvPdf, RooAbsCachedPdf, RooProfileLL, RooProjectedPdf, RooAbsCache - Include forgotten RooFit.h header to fix Solaris compilation problems (Savannah #32026) o RooCacheManager - Add multiple-inclusion guards around templateClassImp to solve Solaris compilation problem (Savannah #32026) o RooDataSet - Change message level of information message in RooDataSet::read from its mistaken ERROR level to INFO level (reported by Jim Smith) git-svn-id: http://root.cern.ch/svn/root/trunk@21286 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 07, 2007
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Rene Brun authored
o RooAbsTestStatistic, RooAbsOptTestStatistic, RooKeysPdf - Adjustments for persistence (correct default ctor etc...) o RooTreeData - Apply cut ranges when plotting asymmetry if specified (Fix from Gerhard Raven) o RooBanner - Increment version tag to v2.30 git-svn-id: http://root.cern.ch/svn/root/trunk@21272 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooDataHist, RooHistPdf, RooCacheManager - Fixes for persistence o RooAbsReal - Use 'pdf-style' compact printing to have uniform printing of p.d.f.s. and functions in RooWorkspace o RooMinuit - Fix for BaBar in contour() git-svn-id: http://root.cern.ch/svn/root/trunk@21257 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 06, 2007
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Wouter Verkerke authored
o RooDataHist - Fix pointer hashing issue that caused mixup in partial bin volume calculation when multiple partial intergrals are calculated off the same object Solves Savannah #31869 git-svn-id: http://root.cern.ch/svn/root/trunk@21232 27541ba8-7e3a-0410-8455-c3a389f83636
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Fons Rademakers authored
git-svn-id: http://root.cern.ch/svn/root/trunk@21231 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooSimPdfBuilder, RooCustomizer - Clean up ownership bookkeeping of nodes that created vs node that are imported. Fixes Savannah #31967 o RooStreamParser - Fix uninitialized value that caused 'conditional jump on uninitialized value' when valgrind test macro of Savannah #31967 git-svn-id: http://root.cern.ch/svn/root/trunk@21221 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 05, 2007
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Wouter Verkerke authored
o RooDataHist, RooDataSet, RooFitResult - Overload SetName() and SetNameTitle() to remove and append from associated directory (Savannah bug #28906) o RooPlot - Fix handling of SetName(), SetNameTitle() as done above - Make sure that RooPlot is attached to gDirectory and internal TH1 is not - Make sure that name changes apply to RooPlot and not to TH1 (Savannah #31371) o RooAbsTestStatistic, RooAbsOptTestStatistic - Fix bug in default value of _splitRange that is propagated to client calculators in Simultaneous + MultiProcessor mode (Savannah #31632) o RooRealSumPdf - Fix bug in default ctor to allow persistence git-svn-id: http://root.cern.ch/svn/root/trunk@21212 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
Commit modular development version of stressRooFit in roofitcore/test git-svn-id: http://root.cern.ch/svn/root/trunk@21204 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 04, 2007
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Wouter Verkerke authored
o RooRealSumPdf - Add default constructor to make persistence possible git-svn-id: http://root.cern.ch/svn/root/trunk@21181 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooProduct - Contributed upgrade by G. Raven that implements factorizing analytical integration o RooRealIntegral - Small change in handling of analytical integration to make RooProduct code work git-svn-id: http://root.cern.ch/svn/root/trunk@21179 27541ba8-7e3a-0410-8455-c3a389f83636
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- Dec 03, 2007
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Wouter Verkerke authored
o RooAbsArg - Make non-inline accessor function for static boolean _inhibitDirty git-svn-id: http://root.cern.ch/svn/root/trunk@21163 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 30, 2007
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Wouter Verkerke authored
o RooResolutionModel, RooSimultaneous, RooAbsCategory - Fix uninitialized values in ctor git-svn-id: http://root.cern.ch/svn/root/trunk@21136 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 29, 2007
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Wouter Verkerke authored
git-svn-id: http://root.cern.ch/svn/root/trunk@21103 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 27, 2007
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Wouter Verkerke authored
o RooMsgService - Fix bug in creation of singleton instance git-svn-id: http://root.cern.ch/svn/root/trunk@21087 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o Module.mk - Forgotten last commit git-svn-id: http://root.cern.ch/svn/root/trunk@21083 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooErrorVar - Fix compiler warning on linux/gcc o RooFormulaVar, RooAbsAnaConvPdf - Fix for persistence o RooGraphSpring, RooGraphEdge, RooGraphNode - Retired, since superceded by new vizGraphTree() functionality o RooHtml - Retired since no longer needed o RooAbsOptGoodnessOfFit, RooAbsGoodnesOfFit - Renamed to RooAbsOptTestStatistic, RooAbsTestStatistic to better cover actual functionality o RooChi2Var, RooNLLVar - Follow base class name change o RooRealMPFE, RooAbsData - Follow friend class name change o Module.mk, inc/LinkDef[12].h - Remove references to deleted classes, follow name changes git-svn-id: http://root.cern.ch/svn/root/trunk@21081 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o Most classes - Bulk migration from cout to RooMsgService o RooSetProxy - Fix compiler warning on Windows o RooSimPdfBuilder - Remove stray debug printouts git-svn-id: http://root.cern.ch/svn/root/trunk@21064 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 23, 2007
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Wouter Verkerke authored
o RooSimPdfBuilder - Back out fix strtok_r problem by Matthew Langston, it doesn't work OK. Instead insert implementation of strtok_r if _WIN32 is defined. git-svn-id: http://root.cern.ch/svn/root/trunk@21025 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 22, 2007
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Wouter Verkerke authored
o RooRealVar, RooAbsRealLValue, RooMCStudy, RooChi2Var, RooAbsData, RooHistError, RooTreeData, RooAbsPdf, RooAbsArg, RooGlobalFunc, RooCmdConfig, RooMath, RooNLLVar, RooAbsReal, RooNumber, RooMsgService, RooNameReg - Changes references to RooCmdArg::none to RooCmdArg::none() - Un-inline all static functions references static data members o RooCmdArg - Rename static RooCmdArg none to _none and make protected. Add public accessor function none() git-svn-id: http://root.cern.ch/svn/root/trunk@21007 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooFitResult - Relax parameter comparison tolerance in isIdentical() from 1e-6 to 5e-5 git-svn-id: http://root.cern.ch/svn/root/trunk@21004 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooTrace - Remove inlining of static control function as this appears to give linking problems under Windows git-svn-id: http://root.cern.ch/svn/root/trunk@21002 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooFitResult - Add seperate tolerance parameter in isIdentical() for correlation comparisons, with a default of 1e-4 git-svn-id: http://root.cern.ch/svn/root/trunk@21000 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
** Bringing trunk up-to-date w.r.t recent changes in branches/dev/roofit branch ** Aggregated messages from branch commits follow --- Date: Fri Oct 19 20:35:30 2007 New Revision: 20422 --- o RooAbsArg - Add debug level print statement in findConstantNodes() o RooAbsAnaConvPdf - Do not expose cached RooCoefVars to constant term finding process. --- Date: Fri Oct 19 21:03:40 2007 New Revision: 20423 --- o RooPlot - Add forwarding function for all revent Set*() methods of TH1 --- Date: Fri Oct 19 21:48:40 2007 New Revision: 20424 --- o RooAbsAnaConvPdf - Back out special handling of exposure of cached RooCoefVars to constant term finding process. o RooObjCacheManager - Do not perform constant term finding on cache contents if cache manager is configured to perform clearOnRedirect for server redirects. --- Date: Wed Oct 31 23:36:10 2007 New Revision: 20587 --- o RooAbsRealLValue - Remove stray debug print statements o RooAddPdf - Add new default ctor to fix persistence introduced by new cache management scheme - Add forgotten initializer to regular ctor o RooAbsCachedPdf - Add formal server-link dependency on cache parameters to RooHistPdf cache representation so that the constant term optimizer can make the correct decision - Make RooObjCacheManager a persistent data member o RooObjCacheManager - Add debug message level information - Make _optCacheObservables a transient data member and initialize it in the default ctor. o RooAbsPdf, RooProjectedPdf - Add new default ctor to fix persistence introduced by new cache management scheme - Make RooObjCacheManager a persistent data member o RooAbsArg - Add methods graphVizTree() that produce input files for AT&Ts graphViz to make graphical representation of object tree. (To make actual graphics run 'dot -Tps -o graph.ps %s' where %s is argument passed to graphVizTree(). o RooSetProxy - Remove stray debug print statements o RooSimultaneous - Initialize forgotten data member in all ctors o RooProdPdf, RooAbsAnaConvPdf - Make RooObjCacheManager a persistent data member o RooSuperCategory - Make contained iterator a transient data member and initialize it in the default ctor. o RooCacheManager - Add explicit separate default ctor. o RooAddModel - Completely new implementation, based on existing RooAddPdf. RooResolutionModel functionality (convolution(),basisCode()) taken from original RooAddModel. Reimplement integration strategy with caching of integral objects, rather than implementing only common analytical component o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf - Remove special hook function that were required for functioning of original RooAddModel o RooObjCacheManager - Keep all _optCacheObservables versions created alive in separate owned list and only delete at end in dtor to avoid dangling pointer in complex optimizations o RooAbsArg - In optimizeCacheMode() ignore nodes that already have been const optimized. Although const optimization normally happens first, late cache optimization that happen upon late creation of objects can take place after const optimization. --- Date: Tue Nov 13 12:04:55 2007 New Revision: 20774 --- o RooAddModel - Completely new implementation, based on existing RooAddPdf. RooResolutionModel functionality (convolution(),basisCode()) taken from original RooAddModel. Reimplement integration strategy with caching of integral objects, rather than implementing only common analytical component o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf - Remove special hook function that were required for functioning of original RooAddModel o RooObjCacheManager - Keep all _optCacheObservables versions created alive in separate owned list and only delete at end in dtor to avoid dangling pointer in complex optimizations o RooAbsArg - In optimizeCacheMode() ignore nodes that already have been const optimized. Although const optimization normally happens first, late cache optimization that happen upon late creation of objects can take place after const optimization. o RooMsgService - Some restructuring to speed up code. - Change topic naming from string to enum. - Change debug-level print macros to take inline pre-decision based on static RooMsgService boolean that indicates if any debug stream is active. Also extend this speedup to doLogD() macro. - Allow multiple Topic specifications in a single stream using bit-wise or to reduce default number of streams from 6 to 2. - Terminate matching logic to streams early for 'universal' streams for which the logic does not depend on object properties. o RooGlobalFunc - Change Topic() argument from RooMsgService::MsgTopic to Int_t to allow specification of multiple topics o RooDataHist, RooMsgService, RooGenContext, RooAddModel, RooFFTConvPdf RooAbsAnaConvPdf, RooAbsReal, RooAddPdf, RooAbsOptGoodnessOfFit, RooAbsCachedPdf RooProfileLL, RooObjCacheManager, RooAbsArg, RooAbsPdf, RooRealIntegral RooAddGenContext, RooProdGenContext, RooConvGenContext, RooProjectedPdf, RooClassFactory RooWorkspace, RooTreeData - Follow change in RooMsgService interface --- Date: Tue Nov 13 13:13:05 2007 New Revision: 20776 --- o RooMCStudy - Initialize _genParams in 2nd ctor (fixes savannah #31139) --- Date: Fri Nov 16 21:24:52 2007 New Revision: 20853 --- o RooProdPdf, RooAddition - Fix memory leaks found with valgrind o RooMsgService, RooRealConstant, RooNumIntFactory, RooMinuit, RooNameReg, RooNumIntConfig, RooArgSet - Add cleanup() function to delete singleton at exit o RooMinuit - Initialize _warnLevel data member (valgrind) o RooAddModel - Disable coefficient projections in convolution mode (savannah #31302) o RooTrace - Remove messages about objects already deleted when not in verbose mode o RooSentinel - New class handling cleanup at exit --- Date: Mon Nov 19 16:41:52 2007 New Revision: 20901 --- o Makefile - Makefile to build stressRooFit o Makefile.arch - Stolen from $ROOTSYS/test o stressRooFit - Driver framework, base class of unit tests and automatic plot, curve, fit result comparison tools that unit tests can request o TestBasic1 - Basic test running fitting, generation and plotting on Gaussian p.d.f --- Date: Wed Nov 21 17:58:28 2007 New Revision: 20965 --- o stressRooFit - Add regression test support for Double_t values and RooTables - In post-test analysis mode, analyze count of (silent) ERROR messages and fail test if they occcur - Eliminate memory leaks in testing framework - Add arguments '-n <N>' to run single test and argument '-mc' to run suite in memory checking mode in which case no references files are opened to avoid ROOT I/O related noise in valgrind leak reports. - Link in 21 new tests o TestBasic2 ... TestBasic22 - New stress testing modules. Modules 4,6,7,11,21 and 22 are empty for now. All others are fully functional. --- Date: Thu Nov 22 14:32:14 2007 New Revision: 20980 --- o test/TestBasic15, test/TestBasic16, test/TestBasic20 - Fix memory leak in test code itself o test/stressRooFit - Activate RooFit internal memory tracing when run in memory check mode o RooDataHist - Fix memory leak o RooMsgService - Add Tracing subject - Fix bug in printing of multi-subject streams - Keep track of total number of (silent) ERROR messages - Add method to access contents of stream configurations o RooIntegrator1D, RooIntegrator2D, RooSegmentedIntegrator1D, RooSegmentedIntegrator2D, RooGaussKronrodIntegrator1D, RooAdaptiveGaussKronronIntegrator1D, RooMCIntegrator, RooGrid - Fix default ctor to initialize all values used in dtor o RooAddModel - Add optional boolean to ctor to take ownership of components. Used in RooAddModel::convolution() - Fix memory leak in convolution() o RooFitResult - Migrations to RooMsgService - Add isIdentical() method for use in regression testing o RooCurve, RooHist - Add isIdentical() method for use in regression testing o Roo1DTable - Make persistable - Add isIdentical() method for use in regression testing o RooMath - Migrations to RooMsgService - Register static memory allocation of CERF lookup table in RooSentinel for cleanup in atexit(). o RooAbsReal - Migrations to RooMsgService - Fix invalid read access due to wrong destructor order in plotAsymOn() - Fix memory leak in plotOn() o RooAbsCollection - Restrict creation of hash tables to deep-copy operations or shallow copy operations of lists with >30 elements o RooAddPdf, RooRealVar, RooDataProjBinding, RooFormulaVar, RooTreeData - Migrations to RooMsgService o RooAbsOptGoodnessOfFit - Fix memory leak o RooAbsPdf - Migrations to RooMsgService - Fix memory leak in fitTo() o RooNumIntFactory - Delete all owned prototype integrators in dtor o RooBinning - Fix ctors to always initialize _xlo and _xhi o RooResolutioModel - Register static identity RooFormulaVar with RooSentinel for cleanup in atexit() o RooSimPdfBuilder - Migrations to RooMsgService - Delete all fitCats and RooSimultaneous instances created by builder in dtor - Return non-const top-level p.d.f. from buildPdf() o RooLinkedList - First delete hash tables, then clear list instead of reverse order to avoid invalid read problems with TList o RooMinuit - Migrations to RooMsgService - Initialize MINUIT print levels to -1 if RooMsgService is operating in silent mode - Trim initial error on parameters if param +/- 2*errors is out of param range o RooSentinel - Add cleanup hooks from RooMath and RooResolutionModel o RooSimultaneous - Fix memory leak - Migrations to RooMsgService o RooProjectedPdf - Implement RooProjectedPdf::CacheElem dtor o RooTable - Add pure virtual isIdentical() interface git-svn-id: http://root.cern.ch/svn/root/trunk@20988 27541ba8-7e3a-0410-8455-c3a389f83636
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- Nov 08, 2007
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Fons Rademakers authored
- updates for the Debian build system - new MIPS and HPPA linux architectures supported - added better checks for Qt4 - added support for external FTGL package is desired git-svn-id: http://root.cern.ch/svn/root/trunk@20724 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 19, 2007
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Wouter Verkerke authored
o RooAbsRealLValue - Remove stray debug print statements o RooAddPdf - Add new default ctor to fix persistence introduced by new cache management scheme - Add forgotten initializer to regular ctor o RooAbsCachedPdf - Add formal server-link dependency on cache parameters to RooHistPdf cache representation so that the constant term optimizer can make the correct decision - Make RooObjCacheManager a persistent data member o RooObjCacheManager - Add debug message level information - Make _optCacheObservables a transient data member and initialize it in the default ctor. o RooAbsPdf, RooProjectedPdf - Add new default ctor to fix persistence introduced by new cache management scheme - Make RooObjCacheManager a persistent data member o RooAbsArg - Add methods graphVizTree() that produce input files for AT&Ts graphViz to make graphical representation of object tree. (To make actual graphics run 'dot -Tps -o graph.ps %s' where %s is argument passed to graphVizTree(). o RooSetProxy - Remove stray debug print statements o RooSimultaneous - Initialize forgotten data member in all ctors o RooProdPdf, RooAbsAnaConvPdf - Make RooObjCacheManager a persistent data member o RooSuperCategory - Make contained iterator a transient data member and initialize it in the default ctor. o RooCacheManager - Add explicit separate default ctor. git-svn-id: http://root.cern.ch/svn/root/trunk@20408 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 15, 2007
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Rene Brun authored
Emergency bug fix. git-svn-id: http://root.cern.ch/svn/root/trunk@20345 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooBanner - Increment version from v2.22 git-svn-id: http://root.cern.ch/svn/root/trunk@20342 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 12, 2007
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Wouter Verkerke authored
o RooExtendedTerm - New p.d.f. class that has no shape but just introduces an extended likelihood term o RooCmdConfig - Add production to null pointer in decodeStringOnTheFly() o RooAbsReal - Fix attachment to of TTree branches that are not of type Double_t. o RooAddPdf - Remove forgotten debug print statements o RooObjCacheManager - In optimizeCacheMode() remove old snapshot of cacheObservables only after new snapshot has been created to resolve cyclical dependency problems where new snapshot is modeled on old snapshot. o RooAbsPdf - Add redirectServersHook() that clears _norm pointer - Add checkfor null _norm object in getVal() and retrieve new normalization object in such cases from syncNormalization() - Migrate messages in generate() to RooMsgService o RooMultiCatIter - Remove requirement that input categories are lvalues as this is not required. o RooSimPdfBuilder - Add check in build code that verifies that auxiliary splitting categories used in composite splits do not depend on any other category of that composite split, i.e. you cannot split in f(x),x, only in f(y),x o RooMinuit - Add protection in contour function agains Minuit failures which cause a null TGraph pointer to be returned o LinkDef3.h,Module.mk - Add class RooExtendedTerm git-svn-id: http://root.cern.ch/svn/root/trunk@20321 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 04, 2007
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Fons Rademakers authored
initial svn patch up script. Also add svn:keywords Id to all files not having the property yet. git-svn-id: http://root.cern.ch/svn/root/trunk@20220 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 02, 2007
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Wouter Verkerke authored
o RooClassFactory - Add forgotten forward declaration to RooAbsPdf o RooAbsCacheElement - Add dummy virtual destructor git-svn-id: http://root.cern.ch/svn/root/trunk@20168 27541ba8-7e3a-0410-8455-c3a389f83636
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- Oct 01, 2007
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Wouter Verkerke authored
git-svn-id: http://root.cern.ch/svn/root/trunk@20167 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
git-svn-id: http://root.cern.ch/svn/root/trunk@20166 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
git-svn-id: http://root.cern.ch/svn/root/trunk@20165 27541ba8-7e3a-0410-8455-c3a389f83636
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Wouter Verkerke authored
o RooAbsCache - New abstract base class for cache objects associated with RooAbsArgs. Caches register themselves with the owning RooAbsArg and propagate all necessary state changes and meta information to objects in the cache o RooCacheManager - Concrete template implementation of RooAbsCache with an interface and functionality styled after RooNormListManager. The template class provide no special handling for cache contents that includes RooAbsArg objects and does not forward hook calls. It is thus mostly intended to cache basic types indexed on a normalization/integration configuration o RooObjCacheManager - Class derived from RooCacheManager<RooAbsCacheElement> that implements all proper call forwarding and handling of state and other meta information to RooAbsArg objects embedded in the cache elements. To facilitate this functionality the RooAbsCacheElement defines a pure virtual method containedArgs() that must be implemented to expose its contents to the cache manager. The default behavior on a serverRedirect hook is to sterilize the cache. OperMode changes are not forwarded by default to the cache contents as cached objects do not necessarily have the same operation mode (e.g. if the cache contains an integral of its owner). Any calls to optimizeCacheMode(), printCompactTreeHook(), and findConstantNodes() are forwarded. Moreover, optimizeCacheMode() calls are remembered and any objects inserted in the cache after such a call was received will be optimized upon insertion in the cache o RooAbsCacheElement - Abstract base class for objects to be managed by RooObjCacheManager. Each object must in addition to its payload implement the containedArgs() member function that exposes the RooAbsArg object content to the manager for processing. The argument passed to containedArgs() indicates the use case for the returned list of objects, allowing the cache payload to return different lists depending upon use. This is for most applications not required. o RooAbsCachedPdf - Abstract base class derived from RooAbsPdf for p.d.f.s that implement value caching in a grid over the entire domain of the observables. The base class implements the overall caching logistics and manages the RooDataHists and RooHistPdfs that respresent the cached contents. Derived classes must inputBaseName() defined a unique name prefix for all cache objects, actualObservales() and actualParameters() to determined the actual observables and parameters given a set of available observables and fillCacheObject() which should fill the RooDataHist cache for a given obs/params configuration with the p.d.fs values. o RooAbsSelfCachedPdf - Abstract base class derived from RooAbsCachedPdf that implements all of the required logistics in RooCachedPdf and only require derived classes from RooAbsSelfCachedPdf to implement evaluate(). Any class derived from RooAbsPdf can thus be trivially switched to derived from RooAbsSelfCachedPdf and gain the caching functionality. o RooCachedPdf - Concrete class derived from RooAbsCachedPdf that implements the caching of an externally provided p.d.f in the constructor. o RooFFTConvPdf - Concrete class derived from RooAbsCachedPdf that implement generic numeric convolution of two input p.d.f.s using FFT technique and convolution theorem. Actual FFTs are calculated by FFTW through TVirtualFFT interface in ROOT. Present implementation only supports convolution in one dimension, but this will be extended later as there are no fundamental limitations in RooAbsCachedPdf nor FFTW. o RooHistPdf - Moved from RooFit to RooFitCore because it is used by caching classes o RooProdPdf - Use new RooObjCacheManager to store partial objects - Fix memory leak (already patched in 15.0.14h) o RooDataHist - Use new RooCacheManager template to cache partial bin volumes - Add new set(),setAllWeights() method to update current weight and all weights respectively, for use in cached p.d.f.s - Add sliceIterator() that iterates over all bins in a lower dimensional slice of the dataset o RooDataHistSliceIter - Class derived from TIterator that implements the iteration over a slice in a reduced number of dimensions in a RooDataHist o RooMsgService - Speed up processing of debug streams in cases where no debug streams are active - add macros series oocoutX and oocxcoutX that allow to associate message with a different object than *this o RooRealBinding - Interface new setValue method that allows value to be set outside default domain, but inside given alternate named range. For use in numeric integrator bindings o RooAbsRealLValue - Add new inRange() method with range name specifier to check against chosen range instead of default range o RooCmdConfig - Fix dangling return pointer problem in decodeStringOnTheFly() method o RooNameSet - Fix bug in refoll() o RooChi2Var, RooNLLVar - Add processing of AddCoefRange() named argument o RooConvCoefVar - Hold p.d.f in proxy without value/shape state propagation to obtain correct dependency of RooConvCoefVar through separate set proxy with parameters that do have state propagation - In getAnalyticalIntegral() ask for integration coefficient specific to coefficient (following interface change in RooAbsAnaConv) o RooEfficiency - Follow interface change in RooCategoryProxy o RooAbsAnaConvPdf - Use new RooObjCacheManager to hold normalization and coefficient representations - Extend getCoefAnalyticalIntegral() interface so that each coefficient can have a separate integration configuration - Modify makeCoefVars() such that it constructs the RooConvCoefVars with actual dependents for each coefficients, rather than inserting dependencies of any of the coefficients in each coefficient. This logic requires support from the implementation class that is interface through a new member function coefVars() o RooAbsReal - Add Boolean data member treeVar that indicates is value buffer is also branch buffer of a tree. This information is already present in the RooAbsReal but is relatively expensive to retrieve and is always needed in the inner loop of data set operations. This extra member significantly speeds up operations - Remove superfluous _norm[] token in name returned by integralNameSuffix() if no normalization set is supplied. - Add a fillDataHist() method that fills a given RooDataHist with a sampling of the given function. Added for support of caching p.d.f.s - Downgrading warning on non-dependent projection variables in plotOn() to a debug level message - Remove function optimizeDirty(),doConstOpt(),undoConstOpt(),findCacheableBranches() findUnusedDatasetVariables() and findRedundantCacheServers() as part of reorganization of optimization functionality. o RooAbsCollection - Use iterator semantics instead of vector semantics to process RooLinkedList contents in assignment operator - Add utility function contentsString() returning stl string with names of contents o RooAddPdf - Rewrite cache management using new RooObjCacheManager that holds projection integrals, range integrals and supplemental normalization lists o RooAbsOptGoodnessOfFit - Improve handling of normalization ranges and reference ranges for test statistics containing RooAddPdfs. New named argument in fitTo() and RooNllVar::ctor() pass reference range for fractions in RooAddPdf components that do not have an explicit fixed definition already. Name all normalization ranges explicitly after the subrange to which the're applied to avoid name clashes and conflicts if multiple normalization ranges are involved. - Rewrite informational messages through RooMsgService - Implement new constOptimizeTestStatistic() function that signals all test statistic components of a RooAbsArg expression tree to perform their constant term optimization - Implement new optimizeCaching() driver function that changes default lazy-evaluation-with-caching scheme to test statistic scheme where only parameters objects propagate state changes and where all components that depend directly or indirectly on observables have lazy evaluation disabled. Changes to p.d.f objects are delegated to RooAbsPdf::optimizeCacheMode(). Changes to dataset are delegated to RooAbsData::optimizeReadingWithCaching() - Implement new optimizeConstantTerms() function that is back end for constOptimizeTestStatistic implementation. o RooAICRegistry, RooNormSetCache - Remove tracking of allocation cycles of RooArgSets as this scheme is superseded by memory pool mechanism for RooArgSet allocation o RooMappedCategory - Follow interface change in RooCategoryProxy. o RooRealMPFE - Follow reorganization of optimization functionality: implement new constOptimizeTestStatistic function for forwarding to slave processes. o RooRealVar - Add new setVal() function with range name to facilite setting of values that are outside default range, but inside specified alternate range. Needed for numeric integration and certain RooAddPdf coefficient projection. o RooAbsArg - Make state management functions public [is/set][Value/ShapeDirty](), setOperMode90 - Add static _flipAClean boolean to support setACleanAdirty() static method. - Implement mechanism for registration of cache objects with base class RooAbsCache. Forward all calls to operModeHook(), redirectServersHook(), optimizeCacheMode() and printCompactTreeHook() to all caches for further processing - Define constOptimize() function and provide default implementation that forwards to all servers - Implement optimizeCacheMode() function that puts expression tree in optimized caching for test-statistics operations (only cache/lazy evaluate nodes that do not (indirectly) depend on observables - Implement findConstantNodes() function that identifies all nodes that depend exclusively on constant observables and >0 observables that are eligible for precalculation and caching in test statistics operations by RooAbsOptTestStatistic::optimizeConstantTerms() - Define constOptimizeTestStatistics that signal an expression tree that any embedded test statistic objects should perform their constant term optimization. Default implementation in RooAbsArg forwards call to all servers. o RooAbsPdf - Use new RooObjCacheManager to manage normalization integrals cache. - Process new SumCoefRange() option in fitTo() that sets the coeffient interpretation range for all embedded RooAddPdf objects of which the interpretation range was not explicitly set - Extend interface of fixAddCoefNormalizationSet(): add extra argument that controls if AddCoef normalization set are forcibly overruled for objects that already have an explicit range setting. o RooRealIntegral - Add some informational messaging through RooMsgService, rewrite existing ones - Speed up numeric summations by precreating the involved RooSuperCategory in the ctor rather than in evaluate(). - Fix bug in dependency insertion: explicitly require servers to be value server to avoid pulling in fake dependents. - Remove obsolete data members - Implement new setACleanADirty() function that atomically flips state of all AClean objects to ADirty for the duration of the integration step. Replaces the much more expensive prepareACleanFunc() that did this only for the objects involved. - Process factorizing terms in integral only if the list is not empty - Process Jacobian terms in integral only if the list is not empty o RooAddGenContext - Adapt to cache management chanches in RooAddPdf o RooNumIntFactory - Use STL classes for internal memory management o RooSetProxyy - Implement operator new() and operator() delete as required because RooArgSet implements them o RooAbsGoodnessOfFit - Store and forward AddCoefRange information for embedded RooAddPdf objects - Implement constOptimizeTestStatistic() and forward to components o RooErrorVar - Follow inRange() interface change in RooAbsRealLValue o RooConvGenContext - Adapt code to make it work with both RooAbsAnaConv objects and the newly introduced RooFFTConvPdf o RooMinuit - Follow reorganization of optimization functionality o RooProjectedPdf - Store projection using new RooObjCacheManager o RooGlobalFunc - Add RooFit::SumCoefRange() named argument for RooAbsPdf::fitTo() and RooNLLVar::ctor() and RooChi2Var::ctor() o RooClassFactory - Extend existing makePdf(),makeFunction and makeClass() functions to also accept RooAbsCategory arguments, to accept an optional string inserted as the return value expression inserted in the evaluate() method of the class created, as well as as option string specifying one or more analytical integrations of the given function expression that will be advertised in the generated getAnalyticalIntegral() code and implemented in the generated analyticalIntegral() code - Add makeAndCompileFunction() and makeAndCompilePdf methods that generate the code and immediate compile it through ROOTs ACliC interface. These functions have a simpler interface because the list of arguments of the function to be created can be specified as a const RooArgSet& rather than a string with a list of names, thus making it easier for on-the-fly definition of compiled objects. - Add defineFunction() and definePdf() methods define and compile a function/pdf using the above functions and immediately instantiate an object of the given type passing the specified RooArgSet arguments to the constructor of the object. These functions make a compiled equivalent of RooFormulaVar based on the TFormula interpreter, i.e. RooAbsReal* f = new RooFormulaVar("f","D(1-2w)",RooArgSet(D,w)) ; becomes RooAbsReal* f = RooClassFactory::defineFunction("f","D(1-2w)",RooArgSet(D,w)) ; o RooAbsCategory - Add Boolean data member treeVar that indicates is value buffer is also branch buffer of a tree. This information is already present in the RooAbsReal but is relatively expensive to retrieve and is always needed in the inner loop of data set operations. This extra member significantly speeds up operations - Construct explit clean name for TBranch name if node is cached, equivalent to what is done in RooAbsReal. Needed because new constOptimizer can also cache RooAbsCategory objects o RooArgSet - Implement operator new() and operator delete() to implement memory pool scheme for RooArgSets. The goal of this implementation is to insure that two RooArgSet pointers are _never_ the same. This allows to RooNormSet cache manager to safely and quickly index integration and normalization configurations by evaluating the contents of a RooArgSet only the first time it sees it. o RooSimultaneous - Implement caching of partial integrals using new RooObjCacheManager - Following interface change in RooCategoryProxy ; o RooAbsData - Defined pure virtual methods optimizeReadingWithCache() and allClientsCached() o RooTreeData - Implement optimizeReadingWithCache() which determines given a p.d.f to be evaluated and a list of the nodes that are cached for it, which observables in the dataset are no longer required because they are either not an observable of the p.d.f, or they exclusively feed nodes that are cached. Reading of these observables is disabled through SetBranchStatus(). - Move allClientsCached() utility function here from RooAbsReal. o RooCategoryProxy - Remove const char*() conversion operator in favor of a const char* label() method to remove possibly ambiguities in C++ math expressions involving category proxies. o LinkDef3.h - Add newly defined classes git-svn-id: http://root.cern.ch/svn/root/trunk@20161 27541ba8-7e3a-0410-8455-c3a389f83636
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- Sep 19, 2007
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Fons Rademakers authored
git-svn-id: http://root.cern.ch/svn/root/trunk@19826 27541ba8-7e3a-0410-8455-c3a389f83636
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Fons Rademakers authored
git-svn-id: http://root.cern.ch/svn/root/trunk@19825 27541ba8-7e3a-0410-8455-c3a389f83636
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- Aug 22, 2007
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Wouter Verkerke authored
o RooPlot - Fix bug in reading part of streamer Streamer() - Fix print statement in getNEvtRange() git-svn-id: http://root.cern.ch/svn/root/trunk@19664 27541ba8-7e3a-0410-8455-c3a389f83636
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- Aug 10, 2007
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Wouter Verkerke authored
o LinkDef2 - Restore accidentally dropped namespace RooFitShortHand git-svn-id: http://root.cern.ch/svn/root/trunk@19592 27541ba8-7e3a-0410-8455-c3a389f83636
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