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  1. Dec 14, 2007
    • Wouter Verkerke's avatar
      · 227ab63f
      Wouter Verkerke authored
        o (Large number of classes)
      
          - Systematically use Riosfwd.h in header files instead
            of <iostream> or Riostream.h
      
          - Include "Riostream.h" in implementations where necessary
      
          - Convert remaining <iostream> to "Riostream" in implementations
      
          - Outline all inline functions using cout or endl to facilitate
            use of fwd declaration of iostreams in all classes
      
          - Elimination of some duplicate headers
      
          - Match use of 'using namespace std' in implementation files
            to classes that actually use STL classes
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21379 27541ba8-7e3a-0410-8455-c3a389f83636
      227ab63f
  2. Dec 10, 2007
    • Rene Brun's avatar
      From Wouter: · 451f30da
      Rene Brun authored
      Fix compilation warnings due to the use of fabs.
      Fix a silly problem in RooClassFactory.cxx
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21314 27541ba8-7e3a-0410-8455-c3a389f83636
      451f30da
    • Rene Brun's avatar
      From Wouter: · d1273e37
      Rene Brun authored
        o RooAbsSelfCachedPdf, RooAbsCacheElement, RooFFTConvPdf,
          RooAbsCachedPdf, RooProfileLL, RooProjectedPdf, RooAbsCache
      
          - Include forgotten RooFit.h header to fix Solaris compilation
            problems (Savannah #32026)
      
        o RooCacheManager
      
          - Add multiple-inclusion guards around templateClassImp
            to solve Solaris compilation problem (Savannah #32026)
      
        o RooDataSet
      
          - Change message level of information message in RooDataSet::read
            from its mistaken ERROR level to INFO level (reported by Jim Smith)
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21286 27541ba8-7e3a-0410-8455-c3a389f83636
      d1273e37
  3. Dec 07, 2007
    • Rene Brun's avatar
      From Wouter: · 8d07456f
      Rene Brun authored
         o RooAbsTestStatistic, RooAbsOptTestStatistic, RooKeysPdf
      
           - Adjustments for persistence (correct default ctor etc...)
      
         o RooTreeData
      
           - Apply cut ranges when plotting asymmetry if specified 
             (Fix from Gerhard Raven)
      
         o RooBanner
      
           - Increment version tag to v2.30
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21272 27541ba8-7e3a-0410-8455-c3a389f83636
      8d07456f
    • Wouter Verkerke's avatar
      · 03dc68d5
      Wouter Verkerke authored
         o RooDataHist, RooHistPdf, RooCacheManager
      
           - Fixes for persistence
      
      
         o RooAbsReal
      
           - Use 'pdf-style' compact printing to have uniform 
             printing of p.d.f.s. and functions in RooWorkspace
      
      
         o RooMinuit
      
           - Fix for BaBar in contour()
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21257 27541ba8-7e3a-0410-8455-c3a389f83636
      03dc68d5
  4. Dec 06, 2007
  5. Dec 05, 2007
    • Wouter Verkerke's avatar
      · aa331685
      Wouter Verkerke authored
        o RooDataHist, RooDataSet, RooFitResult
      
          - Overload SetName() and SetNameTitle() to remove
            and append from associated directory 
            (Savannah bug #28906)
      
      
        o RooPlot
      
          - Fix handling of SetName(), SetNameTitle()
            as done above
      
          - Make sure that RooPlot is attached to gDirectory
            and internal TH1 is not
      
          - Make sure that name changes apply to RooPlot and
            not to TH1 (Savannah #31371)
      
      
        o RooAbsTestStatistic, RooAbsOptTestStatistic
      
          - Fix bug in default value of _splitRange that is propagated
            to client calculators in Simultaneous + MultiProcessor mode
            (Savannah #31632)
      
      
        o RooRealSumPdf
      
          - Fix bug in default ctor to allow persistence
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21212 27541ba8-7e3a-0410-8455-c3a389f83636
      aa331685
    • Wouter Verkerke's avatar
      · 313a0eb9
      Wouter Verkerke authored
        Commit modular development version of stressRooFit
        in roofitcore/test
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21204 27541ba8-7e3a-0410-8455-c3a389f83636
      313a0eb9
  6. Dec 04, 2007
    • Wouter Verkerke's avatar
      · b7234e04
      Wouter Verkerke authored
        o RooRealSumPdf
      
          - Add default constructor to make persistence possible
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21181 27541ba8-7e3a-0410-8455-c3a389f83636
      b7234e04
    • Wouter Verkerke's avatar
      · e8ecd277
      Wouter Verkerke authored
        o RooProduct
      
          - Contributed upgrade by G. Raven that implements factorizing
            analytical integration
      
        o RooRealIntegral
      
          - Small change in handling of analytical integration to make
            RooProduct code work
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21179 27541ba8-7e3a-0410-8455-c3a389f83636
      e8ecd277
  7. Dec 03, 2007
  8. Nov 30, 2007
  9. Nov 29, 2007
  10. Nov 27, 2007
    • Wouter Verkerke's avatar
      · edb0be5c
      Wouter Verkerke authored
         o RooMsgService
      
           - Fix bug in creation of singleton instance
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21087 27541ba8-7e3a-0410-8455-c3a389f83636
      edb0be5c
    • Wouter Verkerke's avatar
      · d646dbb9
      Wouter Verkerke authored
        o Module.mk
        
          -   Forgotten last commit
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21083 27541ba8-7e3a-0410-8455-c3a389f83636
      d646dbb9
    • Wouter Verkerke's avatar
      · d5ba2ad5
      Wouter Verkerke authored
         o RooErrorVar
      
           - Fix compiler warning on linux/gcc
      
          
         o RooFormulaVar, RooAbsAnaConvPdf
      
           - Fix for persistence
      
      
         o RooGraphSpring, RooGraphEdge, RooGraphNode
      
           - Retired, since superceded by new vizGraphTree() functionality
      
      
         o RooHtml
      
           - Retired since no longer needed
      
      
         o RooAbsOptGoodnessOfFit, RooAbsGoodnesOfFit
      
           - Renamed to RooAbsOptTestStatistic, RooAbsTestStatistic to better
             cover actual functionality
      
      
         o RooChi2Var, RooNLLVar
      
           - Follow base class name change
      
      
         o RooRealMPFE, RooAbsData
      
           - Follow friend class name change
      
      
         o Module.mk, inc/LinkDef[12].h
      
           - Remove references to deleted classes, follow name changes
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21081 27541ba8-7e3a-0410-8455-c3a389f83636
      d5ba2ad5
    • Wouter Verkerke's avatar
      · 8d679783
      Wouter Verkerke authored
        o Most classes
      
          - Bulk migration from cout to RooMsgService
      
      
        o RooSetProxy
      
          - Fix compiler warning on Windows
      
      
        o RooSimPdfBuilder
      
          - Remove stray debug printouts
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21064 27541ba8-7e3a-0410-8455-c3a389f83636
      8d679783
  11. Nov 23, 2007
    • Wouter Verkerke's avatar
      · ad3b9fff
      Wouter Verkerke authored
         o RooSimPdfBuilder
      
           - Back out fix strtok_r problem by Matthew Langston, it doesn't work OK.
             Instead insert implementation of strtok_r if _WIN32 is defined.
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21025 27541ba8-7e3a-0410-8455-c3a389f83636
      ad3b9fff
  12. Nov 22, 2007
    • Wouter Verkerke's avatar
      · 2dcd7df1
      Wouter Verkerke authored
        o RooRealVar, RooAbsRealLValue, RooMCStudy, RooChi2Var, RooAbsData,
          RooHistError, RooTreeData, RooAbsPdf, RooAbsArg, RooGlobalFunc,
          RooCmdConfig, RooMath, RooNLLVar, RooAbsReal, RooNumber, RooMsgService,
          RooNameReg
      
            - Changes references to RooCmdArg::none to RooCmdArg::none()
        
            - Un-inline all static functions references static data members
      
      
        o RooCmdArg
      
           - Rename static RooCmdArg none to _none and make protected. Add
             public accessor function none()
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21007 27541ba8-7e3a-0410-8455-c3a389f83636
      2dcd7df1
    • Wouter Verkerke's avatar
      · 636ecd89
      Wouter Verkerke authored
         o RooFitResult
      
           - Relax parameter comparison tolerance in isIdentical() from 1e-6 to 5e-5
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21004 27541ba8-7e3a-0410-8455-c3a389f83636
      636ecd89
    • Wouter Verkerke's avatar
      · e47fa570
      Wouter Verkerke authored
        o RooTrace
      
          - Remove inlining of static control function as this appears
            to give linking problems under Windows
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21002 27541ba8-7e3a-0410-8455-c3a389f83636
      e47fa570
    • Wouter Verkerke's avatar
      · 9c010f52
      Wouter Verkerke authored
        o RooFitResult
      
          - Add seperate tolerance parameter in isIdentical() for correlation
            comparisons, with a default of 1e-4
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@21000 27541ba8-7e3a-0410-8455-c3a389f83636
      9c010f52
    • Wouter Verkerke's avatar
      · 84621d36
      Wouter Verkerke authored
        ** Bringing trunk up-to-date w.r.t recent changes in branches/dev/roofit branch **
      
        Aggregated messages from branch commits follow
      
        --- Date: Fri Oct 19 20:35:30 2007 New Revision: 20422 ---
      
        o RooAbsArg
      
          - Add debug level print statement in findConstantNodes()
      
        o RooAbsAnaConvPdf
      
          - Do not expose cached RooCoefVars to constant term finding process.
      
      
      
        --- Date: Fri Oct 19 21:03:40 2007 New Revision: 20423 ---
      
        o RooPlot
      
          - Add forwarding function for all revent Set*() methods of TH1
      
      
      
        --- Date: Fri Oct 19 21:48:40 2007 New Revision: 20424 ---
      
        o RooAbsAnaConvPdf
      
          - Back out special handling of exposure of cached RooCoefVars 
            to constant term finding process.
      
      
        o RooObjCacheManager
      
          - Do not perform constant term finding on cache contents
            if cache manager is configured to perform clearOnRedirect
            for server redirects.
      
      
      
        --- Date: Wed Oct 31 23:36:10 2007 New Revision: 20587 ---
      
         o RooAbsRealLValue
      
            - Remove stray debug print statements
      
      
         o RooAddPdf
      
            - Add new default ctor to fix persistence introduced by
              new cache management scheme
      
            - Add forgotten initializer to regular ctor
      
      
         o RooAbsCachedPdf
      
            - Add formal server-link dependency on cache parameters to 
              RooHistPdf cache representation so that the constant term
              optimizer can make the correct decision
      
            - Make RooObjCacheManager a persistent data member
      
      
         o RooObjCacheManager
      
           - Add debug message level information
      
           - Make _optCacheObservables a transient data member and initialize
             it in the default ctor.
      
      
         o RooAbsPdf, RooProjectedPdf
      
            - Add new default ctor to fix persistence introduced by
              new cache management scheme
      
            - Make RooObjCacheManager a persistent data member
      
      
         o RooAbsArg
      
            - Add methods graphVizTree() that produce input files
              for AT&Ts graphViz to make graphical representation
              of object tree. (To make actual graphics run 'dot -Tps -o graph.ps %s'
              where %s is argument passed to graphVizTree().
      
         o RooSetProxy
      
            - Remove stray debug print statements
      
      
         o RooSimultaneous
      
            - Initialize forgotten data member in all ctors
      
      
         o RooProdPdf, RooAbsAnaConvPdf
      
            - Make RooObjCacheManager a persistent data member
              
      
         o RooSuperCategory
      
            - Make contained iterator a transient data member
              and initialize it in the default ctor.
      
         
         o RooCacheManager
      
            - Add explicit separate default ctor.
      
      
         o RooAddModel
      
            - Completely new implementation, based on existing RooAddPdf.
              RooResolutionModel functionality (convolution(),basisCode())
              taken from original RooAddModel. Reimplement integration strategy
              with caching of integral objects, rather than implementing
              only common analytical component
      
         o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf
      
            - Remove special hook function that were required for functioning
              of original RooAddModel
      
         o RooObjCacheManager
      
            - Keep all _optCacheObservables versions created alive in separate owned list
              and only delete at end in dtor to avoid dangling pointer in complex
              optimizations
      
         o RooAbsArg
      
            - In optimizeCacheMode() ignore nodes that already have been const optimized.
              Although const optimization normally happens first, late cache optimization
              that happen upon late creation of objects can take place after const optimization.
      
      
      
        --- Date: Tue Nov 13 12:04:55 2007 New Revision: 20774 ---
      
         o RooAddModel
      
            - Completely new implementation, based on existing RooAddPdf.
              RooResolutionModel functionality (convolution(),basisCode())
              taken from original RooAddModel. Reimplement integration strategy
              with caching of integral objects, rather than implementing
              only common analytical component
      
         o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf
      
            - Remove special hook function that were required for functioning
              of original RooAddModel
      
         o RooObjCacheManager
      
            - Keep all _optCacheObservables versions created alive in separate owned list
              and only delete at end in dtor to avoid dangling pointer in complex
              optimizations
      
         o RooAbsArg
      
            - In optimizeCacheMode() ignore nodes that already have been const optimized.
              Although const optimization normally happens first, late cache optimization
              that happen upon late creation of objects can take place after const optimization.
      
         o RooMsgService
      
            - Some restructuring to speed up code. 
      
            - Change topic naming from string to enum. 
      
            - Change debug-level print macros to take inline pre-decision
              based on static RooMsgService boolean that indicates if any debug
              stream is active. Also extend this speedup to doLogD() macro.
      
            - Allow multiple Topic specifications in a single stream using bit-wise
              or to reduce default number of streams from 6 to 2.
      
            - Terminate matching logic to streams early for 'universal' streams
              for which the logic does not depend on object properties.
      
      
         o RooGlobalFunc
      
            - Change Topic() argument from RooMsgService::MsgTopic to Int_t to allow specification
              of multiple topics
      
      
         o RooDataHist, RooMsgService, RooGenContext, RooAddModel, RooFFTConvPdf
           RooAbsAnaConvPdf, RooAbsReal, RooAddPdf, RooAbsOptGoodnessOfFit, RooAbsCachedPdf
           RooProfileLL, RooObjCacheManager, RooAbsArg, RooAbsPdf, RooRealIntegral
           RooAddGenContext, RooProdGenContext, RooConvGenContext, RooProjectedPdf, RooClassFactory
           RooWorkspace, RooTreeData
       
            - Follow change in RooMsgService interface
      
      
      
       --- Date: Tue Nov 13 13:13:05 2007 New Revision: 20776 ---
      
      
         o RooMCStudy
      
           - Initialize _genParams in 2nd ctor (fixes savannah #31139)
      
      
      
       --- Date: Fri Nov 16 21:24:52 2007 New Revision: 20853 ---
      
      
         o RooProdPdf, RooAddition
      
           - Fix memory leaks found with valgrind
      
      
         o RooMsgService, RooRealConstant, RooNumIntFactory, RooMinuit, RooNameReg, RooNumIntConfig, RooArgSet
      
           - Add cleanup() function to delete singleton at exit
      
      
         o RooMinuit
      
           - Initialize _warnLevel data member (valgrind)
      
      
         o RooAddModel
      
           - Disable coefficient projections in convolution mode
             (savannah #31302)
      
      
         o RooTrace
      
           - Remove messages about objects already deleted when not in verbose mode
      
      
         o RooSentinel
      
           - New class handling cleanup at exit
      
      
       --- Date: Mon Nov 19 16:41:52 2007 New Revision: 20901 ---
      
      
         o Makefile
      
           - Makefile to build stressRooFit
      
      
         o Makefile.arch
      
           - Stolen from $ROOTSYS/test
      
      
         o stressRooFit
      
           - Driver framework, base class of unit tests and
             automatic plot, curve, fit result comparison tools
             that unit tests can request
      
      
         o TestBasic1
      
           - Basic test running fitting, generation and plotting on Gaussian p.d.f
      
      
      
       --- Date: Wed Nov 21 17:58:28 2007 New Revision: 20965 ---
      
        o stressRooFit
      
          - Add regression test support for Double_t values
            and RooTables
      
          - In post-test analysis mode, analyze count of
            (silent) ERROR messages and fail test if they
            occcur
      
          - Eliminate memory leaks in testing framework
      
          - Add arguments '-n <N>' to run single test and
            argument '-mc' to run suite in memory checking 
            mode in which case no references files are opened
            to avoid ROOT I/O related noise in valgrind leak reports.
      
          - Link in 21 new tests
      
      
        o TestBasic2 ... TestBasic22
      
          - New stress testing modules. Modules 4,6,7,11,21 and 22
            are empty for now. All others are fully functional.
      
      
      
       --- Date: Thu Nov 22 14:32:14 2007 New Revision: 20980 ---
      
      
         o test/TestBasic15, test/TestBasic16, test/TestBasic20
      
           - Fix memory leak in test code itself
      
      
         o test/stressRooFit
      
           - Activate RooFit internal memory tracing when run in memory check mode
      
      
         o RooDataHist
      
           - Fix memory leak
      
      
         o RooMsgService
      
           - Add Tracing subject
      
           - Fix bug in printing of multi-subject streams 
      
           - Keep track of total number of (silent) ERROR messages
      
           - Add method to access contents of stream configurations
      
      
         o RooIntegrator1D, RooIntegrator2D, RooSegmentedIntegrator1D, RooSegmentedIntegrator2D, 
           RooGaussKronrodIntegrator1D, RooAdaptiveGaussKronronIntegrator1D, RooMCIntegrator, RooGrid
      
           - Fix default ctor to initialize all values used in dtor
      
      
         o RooAddModel
      
           - Add optional boolean to ctor to take ownership of components. Used
             in RooAddModel::convolution()
      
           - Fix memory leak in convolution()
      
      
         o RooFitResult
      
           - Migrations to RooMsgService
      
           - Add isIdentical() method for use in regression testing
      
      
         o RooCurve, RooHist
      
           - Add isIdentical() method for use in regression testing
      
      
         o Roo1DTable
      
           - Make persistable
      
           - Add isIdentical() method for use in regression testing
      
      
         o RooMath
      
           - Migrations to RooMsgService
      
           - Register static memory allocation of CERF lookup table in RooSentinel
             for cleanup in atexit().
      
      
         o RooAbsReal
      
           - Migrations to RooMsgService
      
           - Fix invalid read access due to wrong destructor order in plotAsymOn()
      
           - Fix memory leak in plotOn()
      
      
         o RooAbsCollection
      
           - Restrict creation of hash tables to deep-copy operations
             or shallow copy operations of lists with >30 elements
      
      
         o RooAddPdf, RooRealVar, RooDataProjBinding, RooFormulaVar, RooTreeData
      
           - Migrations to RooMsgService
      
      
         o RooAbsOptGoodnessOfFit
      
           - Fix memory leak
      
      
         o RooAbsPdf
      
           - Migrations to RooMsgService
      
           - Fix memory leak in fitTo()
      
      
         o RooNumIntFactory
                  
           - Delete all owned prototype integrators in dtor
      
      
         o RooBinning
      
           - Fix ctors to always initialize _xlo and _xhi
      
      
         o RooResolutioModel
      
           - Register static identity RooFormulaVar with RooSentinel
             for cleanup in atexit()
      
      
         o RooSimPdfBuilder
      
           - Migrations to RooMsgService
      
           - Delete all fitCats and RooSimultaneous instances created 
             by builder in dtor
      
           - Return non-const top-level p.d.f. from buildPdf()
      
      
         o RooLinkedList
      
           - First delete hash tables, then clear list instead of
             reverse order to avoid invalid read problems with TList
      
      
         o RooMinuit
      
           - Migrations to RooMsgService
      
           - Initialize MINUIT print levels to -1 if RooMsgService
             is operating in silent mode
      
           - Trim initial error on parameters if param +/- 2*errors
             is out of param range
      
      
         o RooSentinel
      
           - Add cleanup hooks from RooMath and RooResolutionModel
      
      
         o RooSimultaneous
      
           - Fix memory leak
      
           - Migrations to RooMsgService
      
      
         o  RooProjectedPdf
      
           - Implement RooProjectedPdf::CacheElem dtor
      
      
         o  RooTable
      
           - Add pure virtual isIdentical() interface
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@20988 27541ba8-7e3a-0410-8455-c3a389f83636
      84621d36
  13. Nov 08, 2007
  14. Oct 19, 2007
    • Wouter Verkerke's avatar
      · 3cdc8687
      Wouter Verkerke authored
         o RooAbsRealLValue
      
            - Remove stray debug print statements
      
      
         o RooAddPdf
      
            - Add new default ctor to fix persistence introduced by
              new cache management scheme
      
            - Add forgotten initializer to regular ctor
      
      
         o RooAbsCachedPdf
      
            - Add formal server-link dependency on cache parameters to 
              RooHistPdf cache representation so that the constant term
              optimizer can make the correct decision
      
            - Make RooObjCacheManager a persistent data member
      
      
         o RooObjCacheManager
      
           - Add debug message level information
      
           - Make _optCacheObservables a transient data member and initialize
             it in the default ctor.
      
      
         o RooAbsPdf, RooProjectedPdf
      
            - Add new default ctor to fix persistence introduced by
              new cache management scheme
      
            - Make RooObjCacheManager a persistent data member
      
      
         o RooAbsArg
      
            - Add methods graphVizTree() that produce input files
              for AT&Ts graphViz to make graphical representation
              of object tree. (To make actual graphics run 'dot -Tps -o graph.ps %s'
              where %s is argument passed to graphVizTree().
      
         o RooSetProxy
      
            - Remove stray debug print statements
      
      
         o RooSimultaneous
      
            - Initialize forgotten data member in all ctors
      
      
         o RooProdPdf, RooAbsAnaConvPdf
      
            - Make RooObjCacheManager a persistent data member
              
      
         o RooSuperCategory
      
            - Make contained iterator a transient data member
              and initialize it in the default ctor.
      
         
         o RooCacheManager
      
            - Add explicit separate default ctor.
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@20408 27541ba8-7e3a-0410-8455-c3a389f83636
      3cdc8687
  15. Oct 15, 2007
  16. Oct 12, 2007
    • Wouter Verkerke's avatar
      · 20950a3e
      Wouter Verkerke authored
         o RooExtendedTerm
      
           - New p.d.f. class that has no shape but just introduces
             an extended likelihood term
      
      
         o RooCmdConfig
      
           - Add production to null pointer in decodeStringOnTheFly()
      
      
         o RooAbsReal
      
           - Fix attachment to of TTree branches that are not of type Double_t.
             
      
         o RooAddPdf 
      
           - Remove forgotten debug print statements
      
      
         o RooObjCacheManager
      
           - In optimizeCacheMode() remove old snapshot of cacheObservables
             only after new snapshot has been created to resolve cyclical
             dependency problems where new snapshot is modeled on old snapshot.
      
         o RooAbsPdf
      
           - Add redirectServersHook() that clears _norm pointer
      
           - Add checkfor null _norm object in getVal() and retrieve
             new normalization object in such cases from syncNormalization()
      
           - Migrate messages in generate() to RooMsgService
        
      
         o RooMultiCatIter
      
           - Remove requirement that input categories are lvalues as this
             is not required.
      
      
         o RooSimPdfBuilder
      
           - Add check in build code that verifies that auxiliary splitting categories
             used in composite splits do not depend on any other category of that
             composite split, i.e. you cannot split in f(x),x, only in f(y),x
      
      
         o RooMinuit
      
           - Add protection in contour function agains Minuit failures which cause
             a null TGraph pointer to be returned
      
      
         o LinkDef3.h,Module.mk
      
           - Add class RooExtendedTerm
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@20321 27541ba8-7e3a-0410-8455-c3a389f83636
      20950a3e
  17. Oct 04, 2007
  18. Oct 02, 2007
  19. Oct 01, 2007
    • Wouter Verkerke's avatar
      test part 2 · 7074767e
      Wouter Verkerke authored
      git-svn-id: http://root.cern.ch/svn/root/trunk@20167 27541ba8-7e3a-0410-8455-c3a389f83636
      7074767e
    • Wouter Verkerke's avatar
      test · 0c1bc3c1
      Wouter Verkerke authored
      git-svn-id: http://root.cern.ch/svn/root/trunk@20166 27541ba8-7e3a-0410-8455-c3a389f83636
      0c1bc3c1
    • Wouter Verkerke's avatar
      dummy change · 399ca643
      Wouter Verkerke authored
      git-svn-id: http://root.cern.ch/svn/root/trunk@20165 27541ba8-7e3a-0410-8455-c3a389f83636
      399ca643
    • Wouter Verkerke's avatar
      · 2cb502ea
      Wouter Verkerke authored
         o RooAbsCache
      
          - New abstract base class for cache objects associated with RooAbsArgs.
            Caches register themselves with the owning RooAbsArg and propagate
            all necessary state changes and meta information to objects in the cache
      
      
         o RooCacheManager
      
          - Concrete template implementation of RooAbsCache with an interface
            and functionality styled after RooNormListManager. The template class
            provide no special handling for cache contents that includes RooAbsArg
            objects and does not forward hook calls. It is thus mostly intended
            to cache basic types indexed on a normalization/integration configuration
      
      
         o RooObjCacheManager
      
          - Class derived from RooCacheManager<RooAbsCacheElement> that implements
            all proper call forwarding and handling of state and other meta information
            to RooAbsArg objects embedded in the cache elements. To facilitate this
            functionality the RooAbsCacheElement defines a pure virtual method
            containedArgs() that must be implemented to expose its contents to
            the cache manager. The default behavior on a serverRedirect hook is
            to sterilize the cache. OperMode changes are not forwarded by default
            to the cache contents as cached objects do not necessarily have the
            same operation mode (e.g. if the cache contains an integral of its owner).
            Any calls to optimizeCacheMode(), printCompactTreeHook(), and findConstantNodes()
            are forwarded. Moreover, optimizeCacheMode() calls are remembered and
            any objects inserted in the cache after such a call was received will be
            optimized upon insertion in the cache
      
         o RooAbsCacheElement
      
          - Abstract base class for objects to be managed by RooObjCacheManager. Each
            object must in addition to its payload implement the containedArgs()
            member function that exposes the RooAbsArg object content to the manager
            for processing. The argument passed to containedArgs() indicates the use
            case for the returned list of objects, allowing the cache payload to
            return different lists depending upon use. This is for most applications
            not required.
      
      
         o RooAbsCachedPdf
      
          - Abstract base class derived from RooAbsPdf for p.d.f.s that implement 
            value caching in a grid over the entire domain of the observables. 
            The base class implements the overall caching logistics and manages
            the RooDataHists and RooHistPdfs that respresent the cached contents.
            Derived classes must inputBaseName() defined a unique name prefix for
            all cache objects, actualObservales() and actualParameters() to
            determined the actual observables and parameters given a set of 
            available observables and fillCacheObject() which should fill the
            RooDataHist cache for a given obs/params configuration with the
            p.d.fs values.
      
      
         o RooAbsSelfCachedPdf
      
          - Abstract base class derived from RooAbsCachedPdf that implements
            all of the required logistics in RooCachedPdf and only require
            derived classes from RooAbsSelfCachedPdf to implement evaluate().
            Any class derived from RooAbsPdf can thus be trivially switched
            to derived from RooAbsSelfCachedPdf and gain the caching functionality.
            
      
         o RooCachedPdf
      
          - Concrete class derived from RooAbsCachedPdf that implements
            the caching of an externally provided p.d.f in the constructor.
      
      
         o RooFFTConvPdf
      
          - Concrete class derived from RooAbsCachedPdf that implement generic
            numeric convolution of two input p.d.f.s using FFT technique
            and convolution theorem. Actual FFTs are calculated by FFTW
            through TVirtualFFT interface in ROOT. Present implementation only supports 
            convolution in one dimension, but this will be extended later
            as there are no fundamental limitations in RooAbsCachedPdf nor FFTW.
       
      
         o RooHistPdf
      
          - Moved from RooFit to RooFitCore because it is used by caching classes
      
      
         o RooProdPdf
      
           - Use new RooObjCacheManager to store partial objects
      
           - Fix memory leak (already patched in 15.0.14h)
      
      
         o RooDataHist
      
           - Use new RooCacheManager template to cache partial bin volumes
      
           - Add new set(),setAllWeights() method to update current weight and all weights
             respectively, for use in cached p.d.f.s
      
           - Add sliceIterator() that iterates over all bins in a lower dimensional 
             slice of the dataset
      
      
         o RooDataHistSliceIter
      
          - Class derived from TIterator that implements the iteration
            over a slice in a reduced number of dimensions in a RooDataHist
      
      
         o RooMsgService
      
           - Speed up processing of debug streams in cases where no debug streams are active
      
           - add macros series oocoutX and oocxcoutX that allow to associate message with
             a different object than *this
      
         o RooRealBinding
      
           - Interface new setValue method that allows value to be set outside default
             domain, but inside given alternate named range. For use in numeric integrator
             bindings
      
      
         o RooAbsRealLValue
      
           - Add new inRange() method with range name specifier to check against chosen
             range instead of default range
      
      
         o RooCmdConfig
      
           - Fix dangling return pointer problem in decodeStringOnTheFly() method
      
      
         o RooNameSet
      
           - Fix bug in refoll()
      
      
         o RooChi2Var, RooNLLVar
      
           - Add processing of AddCoefRange() named argument
      
      
         o RooConvCoefVar
      
           - Hold p.d.f in proxy without value/shape state propagation to obtain
             correct dependency of RooConvCoefVar through separate set proxy
             with parameters that do have state propagation
      
           - In getAnalyticalIntegral() ask for integration coefficient specific
             to coefficient (following interface change in RooAbsAnaConv)
      
      
         o RooEfficiency
      
           - Follow interface change in RooCategoryProxy
      
      
         o RooAbsAnaConvPdf
      
          - Use new RooObjCacheManager to hold normalization and coefficient representations
      
          - Extend getCoefAnalyticalIntegral() interface so that each coefficient
            can have a separate integration configuration
      
          - Modify makeCoefVars() such that it constructs the RooConvCoefVars with
            actual dependents for each coefficients, rather than inserting dependencies
            of any of the coefficients in each coefficient. This logic requires support
            from the implementation class that is interface through a new member function
            coefVars()
      
      
         o RooAbsReal 
      
          - Add Boolean data member treeVar that indicates is value buffer is also
            branch buffer of a tree. This information is already present in the RooAbsReal
            but is relatively expensive to retrieve and is always needed in the inner
            loop of data set operations. This extra member significantly speeds up operations
      
          - Remove superfluous _norm[] token in name returned by integralNameSuffix() if 
            no normalization set is supplied.
      
          - Add a fillDataHist() method that fills a given RooDataHist with a sampling
            of the given function. Added for support of caching p.d.f.s
      
      
          - Downgrading warning on non-dependent projection variables in plotOn() to
            a debug level message
      
          - Remove function optimizeDirty(),doConstOpt(),undoConstOpt(),findCacheableBranches()
            findUnusedDatasetVariables() and findRedundantCacheServers() as part of reorganization
            of optimization functionality.
      
      
         o RooAbsCollection
      
          - Use iterator semantics instead of vector semantics to process RooLinkedList
            contents in assignment operator
      
          - Add utility function contentsString() returning stl string with names
            of contents
      
      
         o RooAddPdf
      
          - Rewrite cache management using new RooObjCacheManager that holds projection
            integrals, range integrals and supplemental normalization lists
      
      
         o RooAbsOptGoodnessOfFit
      
          - Improve handling of normalization ranges and reference ranges for test statistics
            containing RooAddPdfs. New named argument in fitTo() and RooNllVar::ctor() pass
            reference range for fractions in RooAddPdf components that do not have an explicit
            fixed definition already. Name all normalization ranges explicitly after the
            subrange to which the're applied to avoid name clashes and conflicts if multiple
            normalization ranges are involved.
      
          - Rewrite informational messages through RooMsgService
      
          - Implement new constOptimizeTestStatistic() function that signals all test statistic
            components of a RooAbsArg expression tree to perform their constant term optimization
      
          - Implement new optimizeCaching() driver function that changes default lazy-evaluation-with-caching
            scheme to test statistic scheme where only parameters objects propagate state changes and
            where all components that depend directly or indirectly on observables have lazy evaluation
            disabled. Changes to p.d.f objects are delegated to RooAbsPdf::optimizeCacheMode(). Changes
            to dataset are delegated to RooAbsData::optimizeReadingWithCaching()
      
          - Implement new optimizeConstantTerms() function that is back end for constOptimizeTestStatistic
            implementation. 
      
      
        o RooAICRegistry, RooNormSetCache
      
          - Remove tracking of allocation cycles of RooArgSets as this scheme is superseded by
            memory pool mechanism for RooArgSet allocation
      
      
        o RooMappedCategory
      
          - Follow interface change in RooCategoryProxy.
      
      
        o RooRealMPFE
      
          - Follow reorganization of optimization functionality: implement new constOptimizeTestStatistic
            function for forwarding to slave processes.
      
      
        o RooRealVar
      
          - Add new setVal() function with range name to facilite setting of values that are outside
            default range, but inside specified alternate range. Needed for numeric integration and
            certain RooAddPdf coefficient projection.
      
      
        o RooAbsArg
      
          - Make state management functions public [is/set][Value/ShapeDirty](), setOperMode90
        
          - Add static _flipAClean boolean to support setACleanAdirty() static method.
      
          - Implement mechanism for registration of cache objects with base class RooAbsCache.
            Forward all calls to operModeHook(), redirectServersHook(), optimizeCacheMode()
            and printCompactTreeHook() to all caches for further processing
         
          - Define constOptimize() function and provide default implementation that forwards
            to all servers 
      
          - Implement optimizeCacheMode() function that puts expression tree in optimized
            caching for test-statistics operations (only cache/lazy evaluate nodes that
            do not (indirectly) depend on observables
      
          - Implement findConstantNodes() function that identifies all nodes that depend
            exclusively on constant observables and >0 observables that are eligible
            for precalculation and caching in test statistics operations by 
            RooAbsOptTestStatistic::optimizeConstantTerms()
      
          - Define constOptimizeTestStatistics that signal an expression tree that any
            embedded test statistic objects should perform their constant term optimization.
            Default implementation in RooAbsArg forwards call to all servers.
      
      
        o RooAbsPdf
      
          - Use new RooObjCacheManager to manage normalization integrals cache.
      
          - Process new SumCoefRange() option in fitTo() that sets the coeffient
            interpretation range for all embedded RooAddPdf objects of which
            the interpretation range was not explicitly set
      
          - Extend interface of fixAddCoefNormalizationSet(): add extra argument
            that controls if AddCoef normalization set are forcibly overruled
            for objects that already have an explicit range setting.
      
        
         o RooRealIntegral 
      
          - Add some informational messaging through RooMsgService, rewrite existing ones
      
          - Speed up numeric summations by precreating the involved RooSuperCategory
            in the ctor rather than in evaluate().
      
          - Fix bug in dependency insertion: explicitly require servers to be value
            server to avoid pulling in fake dependents.
          
          - Remove obsolete data members
      
          - Implement new setACleanADirty() function that atomically flips state of
            all AClean objects to ADirty for the duration of the integration step.
            Replaces the much more expensive prepareACleanFunc() that did this
            only for the objects involved.
      
          - Process factorizing terms in integral only if the list is not empty
      
          - Process Jacobian terms in integral only if the list is not empty
      
      
        o RooAddGenContext
      
         - Adapt to cache management chanches in RooAddPdf
      
      
        o RooNumIntFactory
      
         - Use STL classes for internal memory management
      
      
        o RooSetProxyy
      
         - Implement operator new() and operator() delete as required because
           RooArgSet implements them 
      
      
        o RooAbsGoodnessOfFit
      
         - Store and forward AddCoefRange information for embedded RooAddPdf objects
      
         - Implement constOptimizeTestStatistic() and forward to components
      
      
        o RooErrorVar
      
         - Follow inRange() interface change in RooAbsRealLValue
      
      
        o RooConvGenContext
      
          - Adapt code to make it work with both RooAbsAnaConv objects and
            the newly introduced RooFFTConvPdf
      
      
        o RooMinuit
      
          - Follow reorganization of optimization functionality
      
      
        o RooProjectedPdf
      
          - Store projection using new RooObjCacheManager
      
      
        o RooGlobalFunc
      
          - Add RooFit::SumCoefRange() named argument for RooAbsPdf::fitTo() 
            and RooNLLVar::ctor() and RooChi2Var::ctor()
      
      
        o RooClassFactory
      
          - Extend existing makePdf(),makeFunction and makeClass() functions
            to also accept RooAbsCategory arguments, to accept an optional string
            inserted as the return value expression inserted in the 
            evaluate() method of the class created, as well as as option string
            specifying one or more analytical integrations of the given function
            expression that will be advertised in the generated getAnalyticalIntegral()
            code and implemented in the generated analyticalIntegral() code
      
          - Add makeAndCompileFunction() and makeAndCompilePdf methods that
            generate the code and immediate compile it through ROOTs ACliC interface.
            These functions have a simpler interface because the list of arguments
            of the function to be created can be specified as a const RooArgSet&
            rather than a string with a list of names, thus making it easier
            for on-the-fly definition of compiled objects.
      
          - Add defineFunction() and definePdf() methods define and compile
            a function/pdf using the above functions and immediately instantiate
            an object of the given type passing the specified RooArgSet arguments
            to the constructor of the object. These functions make a compiled
            equivalent of RooFormulaVar based on the TFormula interpreter, i.e.
      
                 RooAbsReal* f = new RooFormulaVar("f","D(1-2w)",RooArgSet(D,w)) ;
      
            becomes
             
                 RooAbsReal* f = RooClassFactory::defineFunction("f","D(1-2w)",RooArgSet(D,w)) ;
      
         
        o RooAbsCategory
      
         - Add Boolean data member treeVar that indicates is value buffer is also
           branch buffer of a tree. This information is already present in the RooAbsReal
           but is relatively expensive to retrieve and is always needed in the inner
           loop of data set operations. This extra member significantly speeds up operations
      
         - Construct explit clean name for TBranch name if node is cached, equivalent
           to what is done in RooAbsReal. Needed because new constOptimizer can also
           cache RooAbsCategory objects
      
      
        o RooArgSet
      
         - Implement operator new() and operator delete() to implement memory pool scheme
           for RooArgSets. The goal of this implementation is to insure that two RooArgSet
           pointers are _never_ the same. This allows to RooNormSet cache manager to safely
           and quickly index integration and normalization configurations by evaluating
           the contents of a RooArgSet only the first time it sees it.
      
      
        o RooSimultaneous
      
         - Implement caching of partial integrals using new RooObjCacheManager
      
         - Following interface change in RooCategoryProxy ;
      
      
        o RooAbsData
      
         - Defined pure virtual methods optimizeReadingWithCache() and allClientsCached()
      
      
        o RooTreeData
      
         - Implement optimizeReadingWithCache() which determines given a p.d.f to be
           evaluated and a list of the nodes that are cached for it, which observables
           in the dataset are no longer required because they are either not an observable
           of the p.d.f, or they exclusively feed nodes that are cached. Reading of these
           observables is disabled through SetBranchStatus().
        
         - Move allClientsCached() utility function here from RooAbsReal.
      
      
        o RooCategoryProxy
      
         - Remove const char*() conversion operator in favor of a const char* label() method
           to remove possibly ambiguities in C++ math expressions involving category proxies.
      
      
        o LinkDef3.h
      
         - Add newly defined classes
      
      
      git-svn-id: http://root.cern.ch/svn/root/trunk@20161 27541ba8-7e3a-0410-8455-c3a389f83636
      2cb502ea
  20. Sep 19, 2007
  21. Aug 22, 2007
  22. Aug 10, 2007
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